| ORF Position | Coding Strand | Protein Length (aa) | Protein ID | COG ID | Protein Description | Grown Cells Data | ||
| Start | Stop | microaerobically | anaerobically | |||||
| 2 | 1021 | + | 339 | HI0001 | COG0057 | glyceraldehyde-3-phosphate dehydrogenase (gapdH) | + | + |
| 1190 | 3013 | + | 607 | HI0002 | COG1022 | long chain fatty acid coA ligase, putative | - | +/- |
| 3050 | 3838 | - | 262 | HI0003 | COG0561 | conserved hypothetical protein | +/- | - |
| 3854 | 4318 | - | 154 | HI0004 | COG0319 | conserved hypothetical protein | +/- | - |
| 4579 | 5391 | - | 270 | HI0005 | COG1526 | fdhD protein (fdhD) | - | - |
| 5662 | 8748 | + | 1028 | HI0006m | COG0243 | Formate dehydrogenase large subunit | + | +/- |
| 8750 | 9688 | + | 312 | HI0007 | COG0437 | formate dehydrogenase, beta subunit (fdxH) | +/- | - |
| 9681 | 10397 | + | 238 | HI0008 | COG2864 | formate dehydrogenase, gamma subunit (fdxI) | - | + |
| 10467 | 11375 | + | 302 | HI0009 | COG3058 | fdhE protein (fdhE) | +/- | +/- |
| 11414 | 11854 | - | 146 | HI0010 | COG0456 | ribosomal-protein-alanine acetyltransferase (rimI) | +/- | - |
| 11857 | 12261 | - | 134 | HI0011 | COG3050 | DNA polymerase III, psi subunit (holD) | - | +/- |
| 12367 | 13359 | + | 330 | HI0012 | COG2813 | conserved hypothetical protein | - | - |
| 13423 | 14331 | - | 302 | HI0013 | COG1159 | GTP-binding protein (era) | - | - |
| 14328 | 15011 | - | 227 | HI0014 | COG0571 | ribonuclease III (rnc) | +/- | - |
| 15013 | 16062 | - | 349 | HI0015 | COG0681 | signal peptidase I (lepB) | + | + |
| 16071 | 17867 | - | 598 | HI0016 | COG0481 | GTP-binding membrane protein (lepA) | +/- | +/- |
| 18035 | 18418 | - | 127 | HI0017 | COG3445 | conserved hypothetical protein | + | + |
| 18676 | 19335 | + | 219 | HI0018 | COG0692 | uracil DNA glycosylase (ung) | - | - |
| 19405 | 20829 | - | 474 | HI0019 | COG0621 | conserved hypothetical protein | +/- | - |
| 21248 | 22687 | - | 479 | HI0020 | COG0471 | transport protein, putative | +/- | +/- |
| 22689 | 23939 | - | 416 | HI0021 | COG1767/COG3697 | citG protein (citG) | +/- | - |
| 24267 | 25769 | - | 500 | HI0022 | COG3051 | citrate lyase, alpha chain (citF) | + | + |
| 25784 | 26659 | - | 291 | HI0023 | COG2301 | citrate lyase, beta chain (citE) | + | + |
| 26656 | 26943 | - | 95 | HI0024 | COG3052 | citrate lyase, gamma chain (citD) | + | +/- |
| 26981 | 27988 | - | 335 | HI0025 | COG3053 | citrate lyase ligase (citC) | - | - |
| 28239 | 29201 | - | 320 | HI0026 | COG0320 | lipoate biosynthesis protein A (lipA) | +/- | +/- |
| 29255 | 29893 | - | 212 | HI0027 | COG0321 | lipoate biosynthesis protein B (lipB) | - | - |
| 29895 | 30173 | - | 92 | HI0028 | COG2921 | conserved hypothetical protein | +/- | - |
| 30229 | 31410 | - | 393 | HI0029 | COG1686 | penicillin-binding protein 5 (dacA) | - | +/- |
| 31426 | 32289 | - | 287 | HI0030 | COG0797 | lipoprotein, putative | +/- | - |
| 32341 | 33456 | - | 371 | HI0031 | COG0772 | rod shape-determining protein (rodA) | +/- | +/- |
| 33446 | 35401 | - | 651 | HI0032 | COG0768 | penicillin-binding protein 2 (pbp2) | +/- | +/- |
| 35422 | 35889 | - | 155 | HI0033 | COG1576 | conserved hypothetical protein | +/- | - |
| 35943 | 36251 | - | 102 | HI0034 | COG0799 | conserved hypothetical protein | - | - |
| 36376 | 38031 | - | 551 | HI0035 | COG2985 | conserved hypothetical protein | +/- | +/- |
| 38237 | 40015 | + | 592 | HI0036 | COG1133 | ABC transporter, ATP-binding protein | + | +/- |
| 40064 | 41200 | + | 378 | HI0037 | COG1077 | rod shape-determining protein (mreB) | +/- | - |
| 41280 | 42335 | + | 351 | HI0038 | COG1792 | rod shape-determining protein (mreC) | +/- | +/- |
| 42335 | 42823 | + | 162 | HI0039 | COG2891 | rod shape-determining protein (mreD) | - | - |
| 42874 | 43650 | - | 258 | HI0040 | - | conserved hypothetical protein | - | +/- |
| 43660 | 44463 | - | 267 | HI0041 | COG0708 | exodeoxyribonuclease III (xthA) | +/- | +/- |
| 44511 | 45185 | - | 224 | HI0042 | COG0564 | conserved hypothetical protein | - | +/- |
| 45185 | 46249 | - | 354 | HI0043 | COG3768 | conserved hypothetical transmembrane protein | +/- | - |
| 46309 | 46971 | - | 220 | HI0044 | COG0670 | conserved hypothetical transmembrane protein | +/- | +/- |
| 47298 | 47852 | - | 184 | HI0045 | COG3054 | conserved hypothetical protein | +/- | +/- |
| 47919 | 48281 | + | 120 | HI0046 | COG2824 | alkylphosphonate uptake protein (phnA) | + | +/- |
| 48334 | 48972 | - | 212 | HI0047 | COG0800 | 4-hydroxy-2-oxoglutarate aldolase/2-deydro-3-deoxyphosphogluconate aldolase (eda) | + | +/- |
| 48991 | 49848 | - | 285 | HI0048 | COG1028 | oxidoreductase | + | - |
| 49848 | 50792 | - | 314 | HI0049 | COG0524 | 2-dehydro-3-deoxygluconokinase (kdgK) | - | +/- |
| 50812 | 52086 | - | 424 | HI0050m | COG1593 | conserved hypothetical transmembrane protein | - | +/- |
| 52092 | 52589 | - | 165 | HI0051 | COG3090 | conserved hypothetical transmembrane protein | - | - |
| 52628 | 53614 | - | 328 | HI0052 | COG1638 | conserved hypothetical protein | +/- | - |
| 53641 | 54669 | - | 342 | HI0053 | COG1063 | zinc-type alcohol dehydrogenase | +/- | +/- |
| 54779 | 55579 | + | 266 | HI0054 | COG2186 | uxu operon regulator (uxuR) | +/- | - |
| 55607 | 56791 | + | 394 | HI0055 | COG1312 | mannonate dehydratase (uxuA) | +/- | +/- |
| 56844 | 57557 | - | 237 | HI0056 | COG0861 | conserved hypothetical transmembrane protein | + | - |
| 57655 | 59484 | - | 609 | HI0057 | COG0322 | excinuclease ABC, subunit C (uvrC) | +/- | +/- |
| 59486 | 60250 | - | 254 | HI0058 | COG1212 | 3-deoxy-D-manno-octulosonate cytidylyltransferase (kdsB) | - | - |
| 60321 | 61319 | - | 332 | HI0059 | COG1663 | conserved hypothetical protein | +/- | - |
| 61392 | 63155 | - | 587 | HI0060 | COG1132 | ABC transporter, ATP-binding protein (msbA) | - | +/- |
| 63196 | 64206 | - | 788 | HI0061 | COG2333/COG0658 | recombination protein (rec2) | +/- | +/- |
| 65821 | 66258 | + | 145 | HI0062 | COG1734 | dnaK suppressor protein (dksA) | - | - |
| 66506 | 67864 | + | 452 | HI0063 | COG0617 | poly(A) polymerase (pcnB) | +/- | - |
| 67873 | 68355 | + | 160 | HI0064 | COG0801 | 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine-pyrophosphokinase (folK) | +/- | - |
| 68431 | 68907 | + | 158 | HI0065 | COG0802 | conserved hypothetical protein | +/- | - |
| 68915 | 70213 | + | 246 | HI0066 | COG0860/COG1388 | N-acetylmuramoyl-L-alanine amidase, putative | +/- | +/- |
| 70214 | 72103 | + | 629 | HI0067 | COG0323 | DNA mismatch repair protein (mutL) | - | +/- |
| 72111 | 73046 | + | 311 | HI0068 | COG0324 | tRNA delta(2)-isopentenylpyrophosphate transferase (trpX) | +/- | - |
| 73052 | 75997 | + | 981 | HI0069 | COG1391 | glutamate-ammonia-ligase adenylyltransferase (glnE) | +/- | +/- |
| 76082 | 77758 | - | 558 | HI0070 | COG0497 | DNA repair protein (recN) | +/- | +/- |
| 77902 | 78687 | - | 261 | HI0072 | COG0061 | conserved hypothetical protein | +/- | - |
| 78751 | 79455 | + | 234 | HI0071 | COG0576 | heat shock protein (grpE) | + | + |
| 79468 | 79812 | - | 114 | HI0073 | COG1708 | H. influenzae predicted coding region HI0073 | - | - |
| 79805 | 80245 | - | 146 | HI0074 | - | H. influenzae predicted coding region HI0074 | - | - |
| 80526 | 82649 | + | 707 | HI0075 | COG1328 | anaerobic ribonucleoside-triphosphate reductase (nrdD) | +/- | +/- |
| 82767 | 83627 | + | 286 | HI0076 | COG1946 | acyl-CoA thioesterase II (tesB) | +/- | - |
| 83638 | 84504 | + | 288 | HI0077 | COG2833 | H. influenzae predicted coding region HI0077 | - | - |
| 84580 | 85959 | - | 459 | HI0078 | COG0215 | cysteinyl-tRNA synthetase (cysS) | + | - |
| 86062 | 86571 | + | 169 | HI0079 | COG0652 | peptidyl-prolyl cis-trans isomerase B (ppiB) | + | - |
| 86575 | 87006 | + | 143 | HI0080 | COG3692 | conserved hypothetical protein | +/- | - |
| 87148 | 87936 | + | 262 | HI0081 | COG0084 | conserved hypothetical protein | - | +/- |
| 88193 | 88459 | + | 88 | HI0082 | - | H. influenzae predicted coding region HI0082 | - | +/- |
| 88474 | 88689 | + | 71 | HI0083 | - | H. influenzae predicted coding region HI0083 | - | - |
| 88739 | 89062 | - | 107 | HI0084 | COG0526 | thioredoxin (trxM) | + | + |
| 89182 | 90177 | - | 331 | HI0085 | COG1052 | D-lactate dehydrogenase, fermentative (ldhA) | + | - |
| 90190 | 91335 | - | 381 | HI0086 | COG0626 | cystathionine gamma-synthase (metB) | +/- | + |
| 92148 | 93425 | - | 425 | HI0087 | COG0498 | threonine synthase (thrC) | + | + |
| 93468 | 94412 | - | 314 | HI0088 | COG0083 | homoserine kinase (thrB) | +/- | - |
| 94425 | 96872 | - | 815 | HI0089 | COG0460/COG0527 | aspartokinase I / homoserine dehydrogenase I (thrA) | +/- | +/- |
| 97196 | 97909 | + | 237 | HI0090 | COG0325 | conserved hypothetical protein | - | +/- |
| 97949 | 99085 | - | 378 | HI0091 | COG1929 | conserved hypothetical protein | +/- | - |
| 99094 | 100353 | - | 419 | HI0092 | COG2610 | H. influenzae predicted coding region HI0092 | +/- | +/- |
| 100475 | 101581 | - | 368 | HI0093 | COG2508 | conserved hypothetical protein | - | - |
| 101783 | 102103 | - | 106 | HI0094 | COG0451 | H. influenzae predicted coding region HI0094 | - | - |
| 102194 | 102364 | + | 56 | HI0094a | COG1349 | Uncharacterized protein | - | - |
| 102453 | 103208 | - | 251 | HI0095 | COG0500 | conserved hypothetical protein | - | - |
| 103542 | 104117 | + | 191 | HI0096 | - | H. influenzae predicted coding region HI0096 | - | - |
| 104390 | 105274 | + | 294 | HI0097 | COG1840 | iron(III) ABC transporter, periplasmic-binding protein (hitA) | + | + |
| 105491 | 106912 | + | 473 | HI0098 | COG1178 | iron(III) ABC transporter, permease protein (hitB) | +/- | - |
| 106914 | 107969 | + | 351 | HI0099 | COG1130 | iron(III) ABC transporter, ATP-binding protein (hitC) | +/- | - |
| 108004 | 108399 | - | 131 | HI0100 | COG1876 | H. influenzae predicted coding region HI0100 | - | - |
| 108243 | 108683 | - | 146 | HI0101 | COG1876 | H. influenzae predicted coding region HI0101 | +/- | +/- |
| 108685 | 109818 | - | 377 | HI0102 | COG0624 | succinyl-diaminopimelate desuccinylase (dapE) | +/- | + |
| 109846 | 110190 | - | 114 | HI0103 | COG1393 | conserved hypothetical protein | - | +/- |
| 110269 | 112164 | - | 631 | HI0104 | COG0326 | heat shock protein (htpG) | + | + |
| 112381 | 113220 | + | 279 | HI0105 | COG0327 | conserved hypothetical protein | + | - |
| 113277 | 114665 | - | 462 | HI0106 | COG0541 | signal recognition particle protein (ffh) | +/- | +/- |
| 114997 | 116208 | + | 403 | HI0107 | COG1253 | conserved hypothetical protein | - | +/- |
| 116337 | 117230 | + | 297 | HI0108 | COG2966/COG3610 | conserved hypothetical protein | +/- | - |
| 117319 | 117660 | - | 113 | HI0109 | COG3765 | H. influenzae predicted coding region HI0109 | +/- | - |
| 117827 | 119116 | + | 429 | HI0110 | COG0172 | seryl-tRNA synthetase (serS) | + | + |
| 119451 | 120080 | + | 209 | HI0111 | COG0625 | glutathione transferase (bphH) | + | + |
| 120092 | 120388 | - | 98 | HI0112 | COG2963 | H. influenzae predicted coding region HI0112 | +/- | - |
| 120441 | 122675 | + | 744 | HI0113 | COG1629 | hemin receptor (hemR) | - | - |
| 129317 | 131453 | - | 736 | HIN1253+2 | COG1092/COG0116 | Predicted SAM-dependent methyltransferases | +/- | +/- |
| 132027 | 132959 | + | 310 | HIN1254 | COG2821 | Membrane-bound lytic murein transglycosylase | +/- | +/- |
| 132944 | 133729 | + | 261 | HI0118 | COG1179 | conserved hypothetical protein | +/- | + |
| 133907 | 134920 | + | 337 | HI0119 | COG0803 | conserved hypothetical protein | + | + |
| 134970 | 135476 | - | 168 | HI0120 | - | H. influenzae predicted coding region HI0120 | - | - |
| 135589 | 136950 | - | 453 | HI0121 | COG0773 | conserved hypothetical protein | + | - |
| 137335 | 138525 | - | 396 | HI0122 | COG0626 | cystathionine beta-lyase (metC) | - | - |
| 138800 | 139357 | + | 185 | HI0123 | COG0558 | phosphatidylglycerophosphate synthase (pgsA) | - | - |
| 139924 | 140454 | - | 176 | HI0124 | COG0221 | inorganic pyrophosphatase (ppa) | + | + |
| 140689 | 142005 | + | 438 | HI0125 | COG2252 | conserved hypothetical protein | +/- | +/- |
| 142163 | 143149 | - | 328 | HI0126 | COG1130 | ferric ABC transporter, ATP-binding protein (afuC) | + | + |
| 143193 | 145091 | - | 632 | HI0129 | COG1178 | H. influenzae predicted coding region HI0129 | - | +/- |
| 145395 | 146435 | - | 346 | HI0131 | COG1840 | afuA protein | + | + |
| 146601 | 147242 | + | 213 | HI0132 | COG0572 | uridine kinase (udk) | +/- | +/- |
| 147251 | 147838 | + | 195 | HI0133 | COG0717 | deoxycytidine triphosphate deaminase (dcd) | +/- | - |
| 147842 | 149017 | + | 391 | HI0134 | - | H. influenzae predicted coding region HI0134 | +/- | - |
| 149017 | 150207 | + | 396 | HI0135 | COG2814 | conserved hypothetical transmembrane protein | +/- | +/- |
| 150287 | 151801 | - | 504 | HI0136 | COG1160 | GTP-binding protein | +/- | +/- |
| 152492 | 153262 | - | 256 | HI0137 | COG0847 | DNA polymerase III, epsilon subunit (dnaQ) | - | +/- |
| 153323 | 153787 | + | 154 | HI0138 | COG0328 | ribonuclease H (rnh) | - | - |
| 154039 | 155118 | + | 359 | HI0139 | COG3203 | outer membrane protein P2 (ompP2) | + | + |
| 155307 | 156452 | - | 381 | HI0140 | COG1820 | N-acetylglucosamine-6-phosphate deacetylase (nagA) | + | - |
| 156725 | 157537 | - | 270 | HI0141 | COG0363 | glucosamine-6-phosphate isomerase (nagB) | + | +/- |
| 157823 | 158704 | - | 293 | HI0142 | COG0329 | N-acetylneuraminate lyase (nanA) | + | + |
| 158715 | 159581 | - | 288 | HI0143 | COG1737 | conserved hypothetical protein | +/- | - |
| 159574 | 160476 | - | 300 | HI0144 | COG1940 | glucose kinase, putative | +/- | +/- |
| 160522 | 161208 | - | 228 | HI0145 | COG3010 | conserved hypothetical protein | +/- | +/- |
| 161558 | 162547 | + | 329 | HI0146 | COG1638 | conserved hypothetical protein | + | + |
| 162558 | 164459 | + | 633 | HI0147 | COG3090/COG1593 | conserved hypothetical transmembrane protein | +/- | +/- |
| 164623 | 165762 | + | 379 | HI0148 | COG3055 | conserved hypothetical protein | + | + |
| 165924 | 166130 | + | 68 | HI0148.1 | - | H. influenzae predicted coding region HI0148.1 | +/- | +/- |
| 166166 | 166357 | + | 63 | HI0149 | COG2020 | H. influenzae predicted coding region HI0149 | - | - |
| 166400 | 167287 | - | 295 | HI0150 | COG0330 | hflC protein (hflC) | + | - |
| 167287 | 168519 | - | 410 | HI0151 | COG0330 | hflK protein (hflK) | + | + |
| 168629 | 169336 | - | 235 | HI0152 | COG2091 | H. influenzae predicted coding region HI0152 | +/- | - |
| 169396 | 170726 | - | 443 | HIN1287 | COG2704 | Anaerobic C4-dicarboxylate transporter | +/- | +/- |
| 170930 | 171160 | - | 76 | HI0154 | COG0236 | acyl carrier protein (acpP) | + | + |
| 171416 | ||||||||